"Effect of pH buffering capacity and sources of dietary sulfur on rumen fermentation, sulfide production, methane production, sulfate reducing bacteria, and total Archaea in in vitro rumen cultures" BIORESOURCE TECHNOLOGY 186 1 (2015) 25-33-25-33
"Essential oils affect populations of some rumen bacteria in vitro as revealed by microarray (RumenBactArray) analysis" FRONTIERS IN MICROBIOLOGY 6 (2015) 297-297
"Reducing microbial ureolytic activity in the rumen by immunization against urease therein" BMC Veterinary Research 11 (2015) 94-94
"RUMINANT NUTRITION SYMPOSIUM: How to use data on the rumen microbiome to improve our understanding of ruminant nutrition." Journal of animal science 93 4 (2015) 1450-1470-1450-1470
"Effects of garlic oil, nitrate, saponin and their combinations supplemented to different substrates on in vitro fermentation, ruminal methanogenesis, and abundance and diversity of microbial populations" Journal of Applied Microbiology 119 1 (2015) 127-138-127-138
"Fermentative metabolism of an anaerobic, thermophilic consortium on plant polymers and commercial paper samples" BIOMASS & BIOENERGY 75 (2015) 11-22-11-22
"Reducing microbial ureolytic activity in the rumen by immunization against urease therein" BMC VETERINARY RESEARCH 11 (2015) 94-94
"Construction and Evaluation of a Genetic Construct for Specific Detection and Measurement of Propionate by Whole-Cell Bacteria" BIOTECHNOLOGY AND BIOENGINEERING 112 2 (2015) 280-287-280-287
"Comparison of the microbial communities in solid-state anaerobic digestion (SS-AD) reactors operated at mesophilic and thermophilic temperatures" APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 99 2 (2015) 969-980-969-980
"Biological conversion of methane to liquid fuels: Status and opportunities" BIOTECHNOLOGY ADVANCES 32 8 (2014) 1460-1475-1460-1475
"Prebiotic Oligosaccharides: Comparative Evaluation Using In Vitro Cultures of Infants' Fecal Microbiomes" APPLIED AND ENVIRONMENTAL MICROBIOLOGY 80 23 (2014) 7388-7397-7388-7397
"Number of PCR Cycles and Magnesium Chloride Concentration Affect Detection of tet Genes Encoding Ribosomal Protection Proteins in Swine Manure" Advances in Microbiology 4 (2014) 780-787-780-787
"Spatial and temporal variations of microbial community in a mixed plug-flow loop reactor fed with dairy manure" MICROBIAL BIOTECHNOLOGY 7 4 (2014) 332-346-332-346
"Variations in 16S rRNA-based Microbiome Profiling between Pyrosequencing Runs and between Pyrosequencing Facilities" JOURNAL OF MICROBIOLOGY 52 5 (2014) 355-365-355-365
"Effects of microbial and non-microbial factors of liquid anaerobic digestion effluent as inoculum on solid-state anaerobic digestion of corn stover" BIORESOURCE TECHNOLOGY 157 (2014) 188-196-188-196
"Combinations of nitrate, saponin, and sulfate additively reduce methane production by rumen cultures in vitro while not adversely affecting feed digestion, fermentation or microbial communities" BIORESOURCE TECHNOLOGY 155 (2014) 129-135-129-135
"Intestinal microbiome of poultry and its interaction with host and diet." Gut microbes 5 1 (2014) 108-119-108-119
"The structures of the colonic mucosa-associated and luminal microbial communities are distinct and differentially affected by a prolonged murine stressor." Gut microbes 5 6 (2014) 748-760-748-760
"Effects of vanillin, quillaja saponin, and essential oils on in vitro fermentation and protein-degrading microorganisms of the rumen" APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 98 2 (2014) 897-905-897-905
"Effective reduction of enteric methane production by a combination of nitrate and saponin without adverse effect on feed degradability, fermentation, or bacterial and archaeal communities of the rumen" BIORESOURCE TECHNOLOGY 148 (2013) 352-360-352-360
"Evaluation of system performances and microbial communities of two temperature-phased anaerobic digestion systems treating dairy manure" BIORESOURCE TECHNOLOGY 143 (2013) 431-438-431-438
"Evaluation of system performance and microbial communities of a temperature-phased anaerobic digestion system treating dairy manure: Thermophilic digester operated at acidic pH" BIORESOURCE TECHNOLOGY 142 (2013) 625-632-625-632
"Effects of gas composition in headspace and bicarbonate concentrations in media on gas and methane production, degradability, and rumen fermentation using in vitro gas production techniques" JOURNAL OF DAIRY SCIENCE 96 7 (2013) 4592-4600-4592-4600
"Reactor performance and microbial community dynamics during solid-state anaerobic digestion of corn stover at mesophilic and thermophilic conditions" BIORESOURCE TECHNOLOGY 136 (2013) 574-581-574-581
"Isolation and characterization of two thermophilic cellulolytic strains of Clostridium thermocellum from a compost sample" Journal of Applied Microbiology 114 4 (2013) 1001-1007-1001-1007
"Effects of coconut and fish oils on ruminal methanogenesis, fermentation, and abundance and diversity of microbial populations in vitro." Journal of dairy science 96 3 (2013) 1782-1792-1782-1792
"Effects of coconut and fish oils on ruminal methanogenesis, fermentation, and abundance and diversity of microbial populations in vitro" Journal of Dairy Science 96 3 (2013) 1782-1792-1782-1792
"Suppression of methanogenesis in cellulose-fed microbial fuel cells in relation to performance, metabolite formation, and microbial population." Bioresource technology 129 (2013) 281-288-281-288
"Suppression of methanogenesis in cellulose-fed microbial fuel cells in relation to performance, metabolite formation, and microbial population." Bioresource technology 129 (2013) 281-288-281-288
"Comparison of different liquid anaerobic digestion effluents as inocula and nitrogen sources for solid-state batch anaerobic digestion of corn stover" WASTE MANAGEMENT 33 1 (2013) 26-32-26-32
"Effects of quillaja and yucca saponins on communities and select populations of rumen bacteria and archaea, and fermentation in vitro" JOURNAL OF APPLIED MICROBIOLOGY 113 6 (2012) 1329-1340-1329-1340
"Estrogen status alters tissue distribution and metabolism of selenium in female rats" JOURNAL OF NUTRITIONAL BIOCHEMISTRY 23 6 (2012) 532-538-532-538
"Effects of Essential Oils on Methane Production and Fermentation by, and Abundance and Diversity of, Rumen Microbial Populations" APPLIED AND ENVIRONMENTAL MICROBIOLOGY 78 12 (2012) 4271-4280-4271-4280
"Effects of nitrate on methane production, fermentation, and microbial populations in in vitro ruminal cultures" BIORESOURCE TECHNOLOGY 103 1 (2012) 173-179-173-179
"Comparison of Bacterial Profiles of Fish between Storage Conditions at Retails Using DGGE and Banding Pattern Analysis: Consumer’s Perspective" Food and Nutrition Sciences 3 (2012) 190-200-190-200
"Hydrogen and volatile fatty acid production during fermentation of cellulosic substrates by a thermophilic consortium at 50 and 60 degrees C" BIORESOURCE TECHNOLOGY 104 (2012) 424-431-424-431
"Shifts in microbial community structure of granular and liquid biomass in response to changes to infeed and digester design in anaerobic digesters receiving food-processing wastes" Bioresource Technology in press (2012)
"Persistence of resistance to erythromycin and tetracycline in swine manure during simulated composting and lagoon treatments" Microbial E. cology 63 1 (2012) 32-40-32-40
"Quantitative comparisons of select cultured and uncultured microbial populations in the rumen of cattle fed different diets." Journal of animal science and biotechnology 3 1 (2012) 28-?-28-?
"Quantitative analysis of intestinal bacterial populations from term infants fed formula supplemented with fructo-oligosaccharides" Journal of Pediatric Gastroenterology and Nutrition (2012)
"Manipulation of rumen fermentation and ecology of swamp buffalo by coconut oil and garlic powder supplementation" Livestock Science 135 1 (2011) 84-92-84-92
"Effect of ruminal pulse dose of polyunsaturated fatty acids on ruminal microbial populations and duodenal flow and milk profiles of fatty acids" Journal of Dairy Science 94 6 (2011) 2977-2985-2977-2985
"Effects of methanogenic inhibitors on methane production and abundances of methanogens and cellulolytic bacteria in in-vitro ruminal cultures" Applied and Environmental Microbiology 77 8 (2011) 2634-2639-2634-2639
"Estrogen status alters tissue distribution and metabolism of selenium in female rats" The Journal of Nutritional Biochemistry Epub ahead of print (2011)
"Effect of external resistance on bacterial diversity and metabolism in cellulose-fed microbial fuel cells" Bioresource Technology 102 1 (2010) 278-283-278-283
"Novel glycoside hydrolases from a metagenome library of the rumen of Chinese Holstein dairy cows" Applied and Environmental Microbiology 76 19 (2010) 6701-6705-6701-6705
"Interrelations between the microbiotas in the litter and the intestines of commercial broiler chickens" Applied and Environmental Microbiology 76 19 (2010) 6572-6582-6572-6582
"Impact of monensin on rumen microbiota and its stochastic succession" JOURNAL OF DAIRY SCIENCE 93 (2010) 427-427-427-427
"Occurrence and persistence of erythromycin resistance genes (erm) and tetracycline resistance genes (tet) in waste treatment systems on swine farms" Microbial Ecology 60 3 (2010) 479-486-479-486
"Investigating unsaturated fat, monensin, or bromoethanesulfonate in continuous cultures retaining ruminal protozoa. II. Interaction of treatment and presence of protozoa on prokaryotic communities" Journal of Dairy Science 92 8 (2009) 3861-3873-3861-3873
"Technical note: Occurrence in fecal microbiota of genes conferring resistance to both macrolide-lincosamide-streptogramin B and tetracyclines concomitant with feeding of beef cattle with tylosin" Journal of Animal Science 86 12 (2008) 2385-2391-2385-2391
"Application of recent DNA/RNA-based techniques in rumen ecology" Asian-Australian Journal of Animal Science 20 2 (2007) 283-294-283-294
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"Quantitative assessment of tetracycline resistance gene pool in cheese samples by real-time TaqMan® PCR" Applied and Environmental Microbiology 73 5 (2007) 1676-1677-1676-1677
"Development and application of real-time PCR assays for quantification of erm genes conferring resistance to macrolide-lincosamides-streptogramin B in livestock manure and manure management systems" Applied and Environmental Microbiology 73 14 (2007) 4407-4416-4407-4416
"Assessment of ruminal bacterial populations and protozoal generation time in cows fed different methionine sources" Journal of Dairy Science 90 2 (2007) 798-809-798-809
"Development and application of real-time PCR assays for quantification of genes encoding tetracycline resistance" Applied and Environmental Microbiology 71 11 (2005) 6926-6933-6926-6933
"Evaluation of a real-time PCR assay quantifying the ruminal pool size and duodenal flow of protozoal nitrogen" Journal of Dairy Science 88 6 (2005) 2083-2095-2083-2095
"Serial analysis of ribosomal sequence tags (SARST): a high-throughput method for profiling complex microbial communities" Environmental Microbiology 6 2 (2004) 131-144-131-144
"Development of an assay to quantify rumen ciliate protozoal biomass in cows using real-time PCR" Journal of Nutrition 134 12 (2004) 3378-3384-3378-3384
"Degradation of polycyclic aromatic hydrocarbons at low temperature under aerobic and nitrate-reducing conditions in enrichment cultures from northern soils" Applied and Environmental Microbiology 69 1 (2003) 275-284-275-284
"Stability of the bacterial community in a pulp mill effluent treatment system during normal operation and a system shutdown" Water Research 37 20 (2003) 4873-4884-4873-4884
"Technical note: Specific PCR amplification of protozoan 18S rDNA sequences from DNA extracted from ruminal samples of cows" Journal of Animal Science 81 3 (2003) 812-815-812-815
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"Population dynamics and metabolic activity of Pseudomonas abietaniphila BKME-9 within pulp mill wastewater microbial communities assayed by competitive PCR and RT-PCR" FEMS Microbiology Ecology 38 1 (2001) 21-31-21-31
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"DNA-based and culture-based characterization of a hydrocarbon-degrading consortium enriched from arctic soil" Canadian Journal of Microbiology 47 12 (2001) 1107-1115-1107-1115
"Monitoring the size and metabolic activity of the bacterial community during biostimulation of fuel-contaminated soil using competitive PCR and RT-PCR" Microbial Ecology 42 3 (2001) 267-273-267-273
"Dechlorination of polychlorinated methanes by a sequential methanogenic-denitrifying bioreactor system" Applied Microbiology and Biotechnology 53 4 (2000) 484-489-484-489
"Apparent contradiction: psychrotolerant bacteria from hydrocarbon-contaminated Arctic tundra soils that degrade diterpenoids synthesized by trees" Applied and Environmental Microbiology 66 12 (2000) 5148-5154-5148-5154
"Inhibition of methanogenesis by C1- and C2-polychlorinated aliphatic hydrocarbons" Environmental Toxicology and Chemistry 19 9 (2000) 2212-2217-2212-2217
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