Research: 2013 Publications

2013 Publications

Ahn J, Oh S, Suh Y, Moeller SJ, Lee K. 2013. Porcine G(0)/G(1) switch gene 2 (G0S2) expression is regulated during adipogenesis and short-term in-vivo nutritional interventions. Lipids 48(3):209-18.

Alam MJ, Mamuad LL, Kim SH, Jeong CD, Sung HG, Cho SB, Jeon CO, Lee K, Lee SS. 2013. Effect of phytogenic feed additives in soybean meal on in vitro swine fermentation for odor reduction and bacterial community comparison. Asian-Australasian Journal of Animal Sciences 26(2):266-74.

Almeida OC, Pires AV, Susin I, Gentil RS, Mendes CQ, Queiroz MAA, Ferreira EM, Eastridge ML. 2013. Milk fatty acids profile and arterial blood milk fat precursors concentration of dairy goats fed increasing doses of soybean oil. Small Ruminant Res 114(1):152-60.

Bohrer BM, Kyle JM, Boler DD, Rincker PJ, Ritter MJ, Carr SN. 2013. Meta-analysis of the effects of ractopamine hydrochloride on carcass cutability and primal yields of finishing pigs. J Anim Sci 91(2):1015-23.

Bohrer BM, Kyle JM, Little KL, Zerby HN, Boler DD. 2013. The effects of a step-up ractopamine feeding program on growth performance and low-sodium ham characteristics of purebred berkshire pigs. J Anim Sci 91(11):5535-43.

Boyles SL. 2013. Intramuscular Fat and Conception in Cows (Bos taurus). Ohio J Sci 112(2):51-4.

Bridges GA, Day ML, Geary TW, Cruppe LH. 2013. TRIENNIAL REPRODUCTION SYMPOSIUM: Deficiencies in the uterine environment and failure to support embryonic development. J Anim Sci 91(7):3002-13.

Castillo AR, St-Pierre NR, del Rio NS, Weiss WP. 2013. Mineral concentrations in diets, water, and milk and their value in estimating on-farm excretion of manure minerals in lactating dairy cows. J Dairy Sci 96(5):3388-98.

Cheng J and Ockerman HW. 2013. Effects of electrical stimulation on lipid oxidation and warmed-over flavor of precooked roast beef. Asian-Australasian Journal of Animal Sciences 26(2):282-6.

Cheng J, Wang S, Ockerman HW. 2013. Quality preservation of reduced sodium pork patties: Effects of antioxidants on colour and lipid stability. J Sci Food Agric 93(12):2959-62.

Choi YM, Shin S, Wick MP, Choe JH, Lee K. 2013. Muscle fiber characteristics of pectoralis major muscle as related to muscle mass in different japanese quail lines. Animal 7(10):1665-70.

Choi YM, Sarah D, Shin S, Wick MP, Kim BC, Lee K. 2013. Comparative growth performance in different japanese quail lines: The effect of muscle DNA content and fiber morphology. Poult Sci 92(7):1870-7.

Choi YM, Nam KW, Choe JH, Ryu YC, Wick MP, Lee K, Kim BC. 2013. Growth, carcass, fiber type, and meat quality characteristics in large white pigs with different live weights. Livest Sci 155(1):123-9.

Cuiv PO, Gupta R, Goswami HP, Morrison M. 2013. Extending the cellulosome paradigm: the modular Clostridium thermocellum cellulosomal serpin PinA is a broad-spectrum inhibitor of subtilisin-like proteases. Appl Environ Microbiol 79:6173-6175.

Cuiv PO, Klaassens ES, Smith WJ, Mondot S, Durkin AS, Harkins DM, Foster L, McCorrison J, Torralba M, Nelson KE, Morrison M. 2013. Draft Genome Sequence of Enterococcus faecalis PC1.1, a Candidate Probiotic Strain Isolated from Human Feces. Genome announcements 1. e00160-12.

Culp, KC, Claeys, MC, Lemenager, RP, Rusk, CP, Bridges, GA, and Lake, SL. 2013. Effects of continuous and step-up ractopamine hydrochloride supplementation protocols on feeding performance and carcass characteristics of finishing steers. The Professional Animal Scientist. 29(2):141-146.

Daniels KM, Farmer C, Jimenez-Flores R, Rijnkels M. 2013. The long-term impact of epigenetics and maternal influence on the neonate through milk-borne factors and nutrient status. J Anim Sci 91(2):673-5.

Day ML and Nogueira GP. 2013. Management of age at puberty in beef heifers to optimize efficiency of beef production. Animal Frontiers. 3:6-11.

Dunshea FR, Allison JRD, Bertram M, Boler DD, Brossard L, Campbell R, Crane JP, Hennessy DP, Huber L, de lange C, and others. 2013. The effect of immunization against GnRF on nutrient requirements of male pigs: A review. Animal 7(11):1769-78.

Esselburn KM, O'Diam KM, Hill TM, Bateman,H.G.,II, Aldrich JM, Schlotterbeck RL, Daniels KM. 2013. Intake of specific fatty acids and fat alters growth, health, and titers following vaccination in dairy calves. J Dairy Sci 96(9):5826-35.

Ezeji TC, Qureshi N, Blaschek HP. 2013. Microbial production of a biofuel (acetone-butanol-ethanol) in a continuous bioreactor: Impact of bleed and simultaneous product removal. Bioprocess and Biosystems Engineering 36(1):109-16.

Fraley SM, Fraley GS, Karcher DM, Makagon MM, Lilburn MS. 2013. Influence of plastic slatted floors compared with pine shaving litter on pekin duck condition during the summer months. Poult Sci 92(7):1706-11.

Gastaldello AL, Jr., Pires AV, Susin I, Mendes CQ, Queiroz MAA, Amaral RC, Gentil RS, Ferreira EM, Mourao GB, Eastridge ML. 2013. Limestone with different particle size and sodium bicarbonate to feedlot lambs fed high grain diets with or without monensin. Small Ruminant Res 114(1):80-5.

Geary TW, Smith MF, MacNeil MD, Day ML, Bridges GA, Perry GA, Abreu FM, Atkins JA, Pohler KG, Jinks EM, and others. 2013. TRIENNIAL REPRODUCTION SYMPOSIUM: Influence of follicular characteristics at ovulation on early embryonic survival. J Anim Sci 91(7):3014-21.

Geraghty SR, McNamara KA, Dillon CE, Hogan JS, Kwiek JJ, Keim SA. 2013. Buying human milk via the internet: Just a click away. Breastfeeding Medicine 8(6):474-8.

Gerber PJ, Hristov AN, Henderson B, Makkar H, Oh J, Lee C, Meinen R, Montes F, Ott T, Firkins J, and others. 2013. Technical options for the mitigation of direct methane and nitrous oxide emissions from livestock: A review. Animal 7:220-34.

Gowanlock DW, Mahan DC, Jolliff JS, Moeller SJ, Hill GM. 2013. Evaluating the NRC levels of Cu, Fe, Mn, and Zn using organic minerals for grower-finisher swine1,2. J Anim Sci 91(12) 5680-6.

Graugnard DE, Spry ML, Samuel RS, Jolliff JS, Mahan DC, Brennan KM. 2013. Effect of early life ca and P restriction on renal transporters gene expression in post weaning piglets. Faseb Journal 27.

Gürelli G., Dehority BA. 2013. Entodinium dalli m. monospinatum n.m. and Entodinium dalli m. triangulobatum n.m., two new morphotypes of Entodinium dalli Dehority, 1974, from Turkish cattle. Biharean Biologist 7:69-72.

Haas MJ, Stroup RL, Latshaw D. 2013. Soybean meal retains its nutritional value as an animal feed following in situ transesterification. J Am Oil Chem Soc 90(9):1343-9.

Hackmann TJ, Diese LE*, Firkins JL. 2013. Quantifying the responses of mixed rumen microbes to excess carbohydrate. Appl Environ Microbiol 79(12):3786-95.

Hackmann TJ, Keyser BL*, Firkins JL. 2013. Evaluation of methods to detect changes in reserve carbohydrate for mixed rumen microbes. J Microbiol Methods 93(3):284-91.

Han B, Ujor V, Lai LB, Gopalan V, Ezeji TC. 2013. Use of proteomic analysis to elucidate the role of calcium in acetone-butanol-ethanol fermentation by clostridium beijerinckii NCIMB 8052. Appl Environ Microbiol 79(1):282-93.

Harthan LB, McFarland DC, Velleman SG. 2013. Changes in proliferation, differentiation, fibroblast growth factor 2 responsiveness and expression of syndecan-4 and glypican-1 with turkey satellite cell age. Dev Growth Diff 55(5):622-34.

Harthan LB, McFarland DC, Velleman SG. 2013. The effect of syndecan-4 and glypican-1 expression on age-related changes in myogenic satellite cell proliferation, differentiation, and fibroblast growth factor 2 responsiveness. Comparative Biochemistry and Physiology.Part A, Molecular & Integrative Physiology 166(4):590-602.

Hristov AN, Oh J, Firkins JL, Dijkstra J, Kebreab E, Waghorn G, Makkar HPS, Adesogan AT, Yang W, Lee C, and others. 2013. SPECIAL TOPICS-mitigation of methane and nitrous oxide emissions from animal operations: I. A review of enteric methane mitigation options. J Anim Sci 91(11):5045-69.

Hristov AN, Ott T, Tricarico J, Rotz A, Waghorn G, Adesogan A, Dijkstra J, Montes F, Oh J, Kebreab E, Oosting SJ, Gerber PJ, Henderson B, Makkar HP, Firkins JL. 2013. SPECIAL TOPICS-mitigation of methane and nitrous oxide emissions from animal operations: III. A review of animal management mitigation options. J Anim Sci 91(11):5095-113.

Hwang S, Oh KB, Kwon D, Ock S, Lee J, Im G, Lee S, Lee K, Park J. 2013. Improvement of cloning efficiency in minipigs using post-thawed donor cells treated with roscovitine. Mol Biotechnol 55(3):212-6.

Jee J, Hoet AE, Azevedo MP, Vlasova AN, Loerch SC, Pickworth CL, Hanson J, Saif LJ. 2013. Effects of dietary vitamin A content on antibody responses of feedlot calves inoculated intramuscularly with an inactivated bovine coronavirus vaccine. Am J Vet Res 74(10):1353-62.

Johnston LJ, Brumm MC, Moeller SJ, Pohl S, Shannon MC, Thaler RC. 2013. Effects of reduced nocturnal temperature on pig performance and energy consumption in swine nursery rooms. J Anim Sci 91(7):3429-35.

Kang S H, Evans P, Morrison M, McSweeney C. 2013. Identification of metabolically active proteobacterial and archaeal communities in the rumen by DNA- and RNA-derived 16S rRNA gene. J Appl Microbiol 115:644-653.

Karcher DM, Makagon MM, Fraley GS, Fraley SM, Lilburn MS. 2013. Influence of raised plastic floors compared with pine shaving litter on environment and pekin duck condition. Poult Sci 92(3):583-90.

Keim SA, Hogan JS, McNamara KA, Gudimetla V, Dillon CE, Kwiek JJ, Geraghty SR. 2013. Microbial contamination of human milk purchased via the internet. Pediatrics 132(5):E1227-35.

Kurdistani ZK, Rostamzadeh J, Rashidi A, Davis ME. 2013. Evaluation of insulin-like growth factor-I gene polymorphism on growth traits and yearling fleece weight in goats. Small Ruminant Research 111(1-3):10-5.

Li Y, Wei S, Yu Z. 2013. Feedstocks affect the diversity and distribution of propionate CoA-transferase genes (pct) in anaerobic digesters. Microb Ecol 66(2):351-62.

Lv W and Yu Z. 2013. Isolation and characterization of two thermophilic cellulolytic strains of clostridium thermocellum from a compost sample. J Appl Microbiol 114(4):1001-7.

Lv W, Zhang W, Yu Z. 2013. Evaluation of system performances and microbial communities of two temperature-phased anaerobic digestion systems treating dairy manure. Bioresour Technol 143:431-8.

Lv W, Zhang W, Yu Z. 2013. Evaluation of system performance and microbial communities of a temperature-phased anaerobic digestion system treating dairy manure: Thermophilic digester operated at acidic pH. Bioresour Technol 142:625-32.

Malila Y, Tempelman RJ, Sporer KRB, Ernst CW, Velleman SG, Reed KM, Strasburg GM. 2013. Differential gene expression between normal and pale, soft, and exudative turkey meat. Poult Sci 92(6):1621-33.

McBeth LR, St-Pierre NR, Shoemaker DE, Weiss WP. 2013. Effects of transient changes in silage dry matter concentration on lactating dairy cows. J Dairy Sci 96(6):3924-35.

McFarland DC, Pesall JE, Coy CS, Velleman SG. 2013. Effects of 17 beta-estradiol on turkey myogenic satellite cell proliferation, differentiation, and expression of glypican-1, MyoD and myogenin. Comp Biochem Physiol A-Mol Integr Physiol 164(4):565-71.

Metzger SA and Hogan JS. 2013. Short communication: Antimicrobial susceptibility and frequency of resistance genes in escherichia coli isolated from bovine mastitis. J Dairy Sci 96(5):3044-9.

Monson MS, Mendoza KM, Velleman SG, Strasburg GM, Reed KM. 2013. Expression profiles for genes in the turkey major histocompatibility complex B-locus. Poult Sci 92(6):1523-34.

Morrison, M. 2013. Looking large, to make more, out of gut metagenomics. Curr. Opin. Microbiol. 16(5): 630-635.

Morrow LA, Felix TL, Fluharty FL, Daniels KM, Loerch SC. 2013. Effects of hay supplementation in corn-based and dried distillers grains with solubles-based diets on performance and ruminal metabolism in feedlot cattle. Professional Animal Scientist 29(2):124-132.

Morrow LA, Felix TL, Fluharty FL, Daniels KM, Loerch SC. 2013. Effects of sulfur and acidity on performance and digestibility in feedlot lambs fed dried distillers grains with solubles. J Anim Sci 91(5):2211-8.

Mousel MR, Notter DR, Leeds TD, Zerby HN, Moeller SJ, Lewis GS. 2013. Evaluation of columbia, USMARC-composite, suffolk, and texel rams as terminal sires in an extensive rangeland production system: IV. postfabrication carcass component weights. J Anim Sci 91(5):2012-20.

Patra AK and Yu Z. 2013. Effects of coconut and fish oils on ruminal methanogenesis, fermentation, and abundance and diversity of microbial populations in vitro. J Dairy Sci 96(3):1782-92.

Patra AK and Yu Z. 2013. Effects of gas composition in headspace and bicarbonate concentrations in media on gas and methane production, degradability, and rumen fermentation using in vitro gas production techniques. J Dairy Sci 96(7):4592-600.

Patra AK and Yu Z. 2013. Effective reduction of enteric methane production by a combination of nitrate and saponin without adverse effect on feed degradability, fermentation, or bacterial and archaeal communities of the rumen. Bioresour Technol 148(0):352-60.

Powell DJ, McFarland DC, Cowieson AJ, Muir WI, Velleman SG. 2013. The effect of nutritional status on myogenic satellite cell proliferation and differentiation. Poult Sci 92(8):2163-73.

Prideaux L, Kang S, Wagner J, Buckley M, Mahar JE, De Cruz P, Wen Z, Chen L, Xia B, van Langenburg DR, Lockett T, Ng SC, Sung JJ, Desmond P, McSweeney CS, Kirkwood C, Morrison M, Kamm MA. 2013. Impact of ethnicity, geography, and disease on the microbiota in health and inflammatory bowel disease. Inflamm Bowel Dis 19: 2906-2918.

Rismani-Yazdi H, Carver SM, Christy AD, Yu Z, Bibby K, Peccia J, Tuovinen OH. 2013. Suppression of methanogenesis in cellulose-fed microbial fuel cells in relation to performance, metabolite formation, and microbial population. Bioresour Technol 129:281-8.

Rodrigues ADP, Peres RFG, Lemes AP, Martins T, Pereir MHC, Day ML, Vasconcelos JLM. 2013. Progesterone-based strategies to induce ovulation in prepubertal nellore heifers. Theriogenology 79(1):135-41.

Selvaraj RK. 2013. Avian CD4(+)CD25(+) regulatory T cells: Properties and therapeutic applications. Dev Comp Immunol 41(3):397-402.

Selvaraj RK, Shanmugasundaram R. Regulatory T Cells in Avian Species. Adv. Anim. Vet. Sci. 1 (5): 129 - 133.

Serr J., Li X, and Lee K. 2013. The regulation of lipolysis in adipose tissue. J. Ani. Sci. Technol. 55:303–314.

Shanmugasundaram R and Selvaraj RK. 2013. In ovo injection of anti-chicken CD25 monoclonal antibodies depletes CD4(+)CD25(+) T cells in chickens. Poult Sci 92(1):138-42.

Shanmugasundaram R, Sifri M, Selvaraj RK. 2013. Effect of yeast cell product (CitriStim) supplementation on broiler performance and intestinal immune cell parameters during an experimental coccidial infection. Poult Sci 92(2):358-63.

Shanmugasundaram R, Sifri M, Selvaraj RK. 2013. Effect of yeast cell product supplementation on broiler cecal microflora species and immune responses during an experimental coccidial infection. Poult Sci 92(5):1195-201.

Shi J, Wang Z, Stiverson JA, Yu Z, Li Y. 2013. Reactor performance and microbial community dynamics during solid-state anaerobic digestion of corn stover at mesophilic and thermophilic conditions. Bioresour Technol 136:574-81.

Shin J, McFarland DC, Velleman SG. 2013. Migration of turkey muscle satellite cells is enhanced by the syndecan-4 cytoplasmic domain through the activation of RhoA. Mol Cell Biochem 375(1-2):115-30.

Shin J, McFarland DC, Strasburg GM, Velleman SG. 2013. Function of death-associated protein 1 in proliferation, differentiation, and apoptosis of chicken satellite cells. Muscle Nerve 48(5):777-90.

Song Y, McFarland DC, Velleman SG. 2013. Growth and sex effects on the expression of syndecan-4 and glypican-1 in turkey myogenic satellite cell populations. Mol Cell Biochem 378(1-2):65-72.

Song Y, Ahn J, Suh Y, Davis ME, Lee K. 2013. Identification of novel tissue-specific genes by analysis of microarray databases: A human and mouse model. PLoS One 8(5):e64483.

Swank VA, Yoho WSB, O'Diam KM, Eastridge ML, Niehaus AJ, Daniels KM. 2013. Jersey calf performance in response to high-protein, high-fat liquid feeds with varied fatty acid profiles: Blood metabolites and liver gene expression. J Dairy Sci 96(6):3845-56.

Teixeira, IAMA, St-Pierre, N., Cannas, A, Souza, AP, Fernandes, MHR. 2013. Net energy and protein requirements for growth of goat kids.  77 EAAP publication No. 134 [Energy and protein metabolism and nutrition in sustainable animal production] 77(134):77-78.

Utt MD and Day ML. 2013. TRIENNIAL REPRODUCTION SYMPOSIUM: The obstacle course to successful establishment of pregnancy in domestic livestock species. J Anim Sci 91(7):2993-9.

Velleman SG, Song Y, Shin J, McFarland DC. 2013. Modulation of turkey myogenic satellite cell differentiation through the shedding of glypican-1. Comparative Biochemistry and Physiology A-Molecular & Integrative Physiology 164(1):36-43.

Wang L, Hatem A, Catalyurek UV, Morrison M, Yu Z. 2013. Metagenomic insights into the carbohydrate-active enzymes carried by the microorganisms adhering to solid digesta in the rumen of cows. Plos One 8(11):e78507.

Wei S, Morrison M, Yu Z. 2013. Bacterial census of poultry intestinal microbiome. Poult Sci 92(3):671-83.

Wei S, Gutek A*, Lilburn M, Yu Z. 2013. Abundance of pathogens in the gut and litter of broiler chickens as affected by bacitracin and litter management. Vet Microbiol 166(3-4):595-601.

Weiss WP, Shoemaker DE, McBeth LR, St-Pierre NR. 2013. Effects on lactating dairy cows of oscillating dietary concentrations of unsaturated and total long-chain fatty acids. J Dairy Sci 96(1):506-14.

Wenner BA, Zerby HN, Boler DD, Gebreyes WA, Moeller SJ. 2013. Effect of mannan oligosaccharides (bio-mos) and outdoor access housing on pig growth, feed efficiency and carcass composition. J Anim Sci 91(10):4936-44.

Xu F, Shi J, Lv W, Yu Z, Li Y. 2013. Comparison of different liquid anaerobic digestion effluents as inocula and nitrogen sources for solid-state batch anaerobic digestion of corn stover. Waste Manage 33(1):26-32.

Yang S, Suh Y, Choi YM, Shin S, Han JY, Lee K. 2013. Loss of fat with increased adipose triglyceride lipase-mediated lipolysis in adipose tissue during laying stages in quail. Lipids 48(1):13-21.

Yasmeen R, Reichert B, Deiuliis J, Yang F, Lynch A, Meyers J, Sharlach M, Shin S, Volz KS, Green KB, Lee K, Alder H, Duester G, Zechner R, Rajagopalan S, Ziouzenkova O. 2013. Autocrine function of aldehyde dehydrogenase 1 as a determinant of diet- and sex-specific differences in visceral adiposity. Diabetes 62(1):124-36.

Yoder PS, St-Pierre NR, Daniels KM, O'Diam KM, Weiss WP. 2013. Effects of short-term variation in forage quality and forage to concentrate ratio on lactating dairy cows. J Dairy Sci 96(10):6596-609.

Yoho WSB, Swank VA, Eastridge ML, O'Diam KM, Daniels KM. 2013. Jersey calf performance in response to high-protein, high-fat liquid feeds with varied fatty acid profiles: Intake and performance. J Dairy Sci 96(4):2494-506.

Yu Z, Morrison M. 2013. Serial analysis of V1 ribosomal sequence tags. In: Nelson, K. E. (Ed.) Encyclopedia of Metagenomics: SpringerReference ( Springer-Verlag Berlin Heidelberg, doi: 10.1007/SpringerReference_384408.

Zhang X, Davis ME, Moeller SJ, Ottobre JS. 2013. Effects of selection for blood serum IGF-I concentration on reproductive performance of female angus beef cattle. J Anim Sci 91(9):4104-15.

Zhang Y and Ezeji TC. 2013. Transcriptional analysis of clostridium beijerinckii NCIMB 8052 to elucidate role of furfural stress during acetone butanol ethanol fermentation. Biotechnol Biofuels 6:66.